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Project title Lab Organism
Fishing the genome for transcription factor targets and cis regulatory code Amacher Zebrafish
Regulation of oscillatory gene expression during vertebrate segmentation Amacher Zebrafish
Resampling-based empirical Bayes multiple testing procedures and applications to DNA microarray-based genetic mapping and gene expression studies. Dudoit Budding yeast
Statistical and computational methods for the analysis of high-throughput alternative splicing microarray experiments. Dudoit Fruit fly
Comprehensive characterization of the regulatory network in the early Drosophila embryo Eisen Fruit fly
Cortical rotation Gerhart Western clawed frog
Axis formation and neural induction Harland Western clawed frog
The role of FGF8 in mesoderm formation and neural patterning Harland Western clawed frog
Polarized Cell Shape Changes During Xenopus Gastrulation Harland Western clawed frog
Developmental function of miRNAs in Xenopus tropicalis Harland Western clawed frog
Mouse development Harland Mouse
BMP Antagonism and the Regulation of Neural Stem Cells Harland Mouse
Characterization of novel genes essential for mammalian skeletal development. Harland Mouse
Using comparative genomics to investigate the ancestral animal genome King Choanoflagellates
Assaying the ancient functions of genes required for multicellular development King Choanoflagellates
Cell and developmental biology of choanoflagellates King Choanoflagellates
Phylogenetics of choanoflagellates and early-branching animals King Choanoflagellates
Evolution of dorsal-ventral patterning Levine Mosquito
Computational models for Notch signaling Levine Fruit fly
Gene network for midline formation Levine Fruit fly
Evolution of ventral midline Levine Honeybee
Gene Network for Heart Migration Levine Sea squirt
Australian Wet Tropics Moritz
ENCODE: Alignment and annotation of 1% of the human genome Pachter Human
Evolution of segmentation mechanisms Patel Amphipod
Biochemistry and regulation of P element transposase, the mechanism of transposition and DNA repair Rio Fruit fly
Modeling the self-organizing behavior of the developing retina Rokhsar
Evolution of the nervous system Rokhsar Starlet anemone
Biochemistry of Transcription and Chromatin Transactions Tjian Fruit fly
The significance of moulting in Ecdysozoan evolution Valentine
The Biomineralization Genes of Sea Urchins Wilt
Statistical Methods in Genomics van der Laan